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Class: ParasiteDensity

method and value of determined parasite density

URI: portable_microhaplotype_object:ParasiteDensity

classDiagram class ParasiteDensity click ParasiteDensity href "../ParasiteDensity" ParasiteDensity : density ParasiteDensity : method

Slots

Name Cardinality and Range Description Inheritance
method 1
String		 the method of how this density was obtained direct
density 1
Double		 the density in microliters direct

Usages

used by used in type used
SpecimenInfo parasite_density_info range ParasiteDensity

Identifier and Mapping Information

Schema Source

  • from schema: https://plasmogenepi.github.io/portable-microhaplotype-object

Mappings

Mapping Type Mapped Value
self portable_microhaplotype_object:ParasiteDensity
native portable_microhaplotype_object:ParasiteDensity

LinkML Source

Direct

name: ParasiteDensity
description: method and value of determined parasite density
from_schema: https://plasmogenepi.github.io/portable-microhaplotype-object
attributes:
  method:
    name: method
    description: the method of how this density was obtained
    examples:
    - value: qpcr
    - value: microscopy
    from_schema: https://plasmogenepi.github.io/portable-microhaplotype-object
    rank: 1000
    domain_of:
    - ParasiteDensity
    range: string
    required: true
    pattern: ^[A-z-._0-9 ]+$
  density:
    name: density
    description: the density in microliters
    examples:
    - value: '25.0'
    - value: 10e5
    from_schema: https://plasmogenepi.github.io/portable-microhaplotype-object
    rank: 1000
    domain_of:
    - ParasiteDensity
    range: double
    required: true
    minimum_value: 0
    pattern: ^[-+]?\\d*\\.?\\d+(?:[eE][-+]?\\d+)?$

Induced

name: ParasiteDensity
description: method and value of determined parasite density
from_schema: https://plasmogenepi.github.io/portable-microhaplotype-object
attributes:
  method:
    name: method
    description: the method of how this density was obtained
    examples:
    - value: qpcr
    - value: microscopy
    from_schema: https://plasmogenepi.github.io/portable-microhaplotype-object
    rank: 1000
    alias: method
    owner: ParasiteDensity
    domain_of:
    - ParasiteDensity
    range: string
    required: true
    pattern: ^[A-z-._0-9 ]+$
  density:
    name: density
    description: the density in microliters
    examples:
    - value: '25.0'
    - value: 10e5
    from_schema: https://plasmogenepi.github.io/portable-microhaplotype-object
    rank: 1000
    alias: density
    owner: ParasiteDensity
    domain_of:
    - ParasiteDensity
    range: double
    required: true
    minimum_value: 0
    pattern: ^[-+]?\\d*\\.?\\d+(?:[eE][-+]?\\d+)?$