Class: MicrohaplotypesDetected

the microhaplotypes detected in a targeted amplicon analysis

URI: portable_microhaplotype_object:MicrohaplotypesDetected

classDiagram class MicrohaplotypesDetected click MicrohaplotypesDetected href "../MicrohaplotypesDetected" MicrohaplotypesDetected : bioinformatics_run_id MicrohaplotypesDetected : experiment_samples MicrohaplotypesDetected --> "1..*" MicrohaplotypesForSample : experiment_samples click MicrohaplotypesForSample href "../MicrohaplotypesForSample"

Slots

Name	Cardinality and Range	Description	Inheritance
bioinformatics_run_id	1 Integer	the index into bioinformatics_run_info list	direct
experiment_samples	1..* MicrohaplotypesForSample	a list of the microhaplotypes detected for a sample by targets	direct

Usages

used by	used in	type	used
PortableMicrohaplotypeObject	microhaplotypes_detected	range	MicrohaplotypesDetected

Identifier and Mapping Information

Schema Source

from schema: https://plasmogenepi.github.io/portable-microhaplotype-object

Mappings

Mapping Type	Mapped Value
self	portable_microhaplotype_object:MicrohaplotypesDetected
native	portable_microhaplotype_object:MicrohaplotypesDetected

LinkML Source

Direct

name: MicrohaplotypesDetected
description: the microhaplotypes detected in a targeted amplicon analysis
from_schema: https://plasmogenepi.github.io/portable-microhaplotype-object
slots:
- bioinformatics_run_id
attributes:
  experiment_samples:
    name: experiment_samples
    description: 'a list of the microhaplotypes detected for a sample by targets '
    from_schema: https://plasmogenepi.github.io/portable-microhaplotype-object
    rank: 1000
    domain_of:
    - MicrohaplotypesDetected
    range: MicrohaplotypesForSample
    required: true
    multivalued: true
    inlined: true
    inlined_as_list: true

Induced

name: MicrohaplotypesDetected
description: the microhaplotypes detected in a targeted amplicon analysis
from_schema: https://plasmogenepi.github.io/portable-microhaplotype-object
attributes:
  experiment_samples:
    name: experiment_samples
    description: 'a list of the microhaplotypes detected for a sample by targets '
    from_schema: https://plasmogenepi.github.io/portable-microhaplotype-object
    rank: 1000
    alias: experiment_samples
    owner: MicrohaplotypesDetected
    domain_of:
    - MicrohaplotypesDetected
    range: MicrohaplotypesForSample
    required: true
    multivalued: true
    inlined: true
    inlined_as_list: true
  bioinformatics_run_id:
    name: bioinformatics_run_id
    description: the index into bioinformatics_run_info list
    from_schema: https://plasmogenepi.github.io/portable-microhaplotype-object
    rank: 1000
    alias: bioinformatics_run_id
    owner: MicrohaplotypesDetected
    domain_of:
    - MicrohaplotypesDetected
    - ReadCountsByStage
    range: integer
    required: true
    pattern: ^[0-9]+$