StageReadCounts

Information on the reads counts at several stages.

Auto-generated R6 class from JSON Schema.

Format

An R6::R6Class() generator object.

Constructor

new(...) supports the following arguments.

• reads: The read counts for this stage.

• stage: The stage of the pipeline, e.g. demultiplexed, denoised, etc.

• extras: Additional properties not explicitly defined in the schema.

Methods

See inline method documentation for initialize(), validate(), to_list(), to_json_list(), and to_json().

Public fields

reads

The read counts for this stage.

stage

The stage of the pipeline, e.g. demultiplexed, denoised, etc.

extras

Additional properties not explicitly defined in the schema.

Methods

Public methods

• StageReadCounts$new()

• StageReadCounts$validate()

• StageReadCounts$to_list()

• StageReadCounts$to_json_list()

• StageReadCounts$to_json()

• StageReadCounts$clone()

---

StageReadCounts$new()

Create a new instance.

Usage

StageReadCounts$new(reads = NA_real_, stage = NA_character_, extras = list())

Arguments

reads

The read counts for this stage.

stage

The stage of the pipeline, e.g. demultiplexed, denoised, etc.

extras

Additional properties not explicitly defined in the schema.

---

StageReadCounts$validate()

Validate the current instance against schema-derived constraints.

Usage

StageReadCounts$validate()

---

StageReadCounts$to_list()

Convert the object to a plain R list using in-memory values.

Usage

StageReadCounts$to_list()

---

StageReadCounts$to_json_list()

Convert the object to a JSON-ready R list.

Usage

StageReadCounts$to_json_list()

---

StageReadCounts$to_json()

Convert the object to a JSON string.

Usage

StageReadCounts$to_json(pretty = FALSE, auto_unbox = TRUE, ...)

Arguments

pretty

Logical; pretty-print the JSON.

auto_unbox

Logical; passed to jsonlite::toJSON().

...

Additional arguments passed to jsonlite::toJSON().

---

StageReadCounts$clone()

The objects of this class are cloneable with this method.

Usage

StageReadCounts$clone(deep = FALSE)

Arguments

deep

Whether to make a deep clone.