Pseudocigar — Pseudocigar • pmotoolsr

Information on pseudocigar for a sequence.

Auto-generated R6 class from JSON Schema.

Format

An R6::R6Class() generator object.

new(...) supports the following arguments.

pseudocigar_generation_description: A description of how the pseudocigar information was generated.
pseudocigar_seq: The pseudocigar itself.
ref_loc: The genomic location the pseudocigar is in reference to.
extras: Additional properties not explicitly defined in the schema.

See inline method documentation for initialize(), validate(), to_list(), to_json_list(), and to_json().

pseudocigar_generation_description: A description of how the pseudocigar information was generated.
pseudocigar_seq: The pseudocigar itself.
ref_loc: The genomic location the pseudocigar is in reference to.
extras: Additional properties not explicitly defined in the schema.

Create a new instance.

Pseudocigar$new(
  pseudocigar_generation_description = NULL,
  pseudocigar_seq = NA_character_,
  ref_loc = NULL,
  extras = list()
)

pseudocigar_generation_description: A description of how the pseudocigar information was generated.
pseudocigar_seq: The pseudocigar itself.
ref_loc: The genomic location the pseudocigar is in reference to.
extras: Additional properties not explicitly defined in the schema.

Validate the current instance against schema-derived constraints.

Pseudocigar$validate()

Convert the object to a plain R list using in-memory values.

Pseudocigar$to_list()

Convert the object to a JSON-ready R list.

Pseudocigar$to_json_list()

Convert the object to a JSON string.

Pseudocigar$to_json(pretty = FALSE, auto_unbox = TRUE, ...)

The objects of this class are cloneable with this method.

Pseudocigar$clone(deep = FALSE)