MarkerOfInterest — MarkerOfInterest • pmotoolsr

A specific genomic location of interest, e.g. drug resistance, or other phenotypical marker.

Auto-generated R6 class from JSON Schema.

Format

An R6::R6Class() generator object.

new(...) supports the following arguments.

associations: A list of associations with this marker, e.g. SP resistance, etc.
marker_location: The genomic location.
extras: Additional properties not explicitly defined in the schema.

See inline method documentation for initialize(), validate(), to_list(), to_json_list(), and to_json().

associations: A list of associations with this marker, e.g. SP resistance, etc.
marker_location: The genomic location.
extras: Additional properties not explicitly defined in the schema.

Create a new instance.

MarkerOfInterest$new(
  associations = NULL,
  marker_location = NULL,
  extras = list()
)

associations: A list of associations with this marker, e.g. SP resistance, etc.
marker_location: The genomic location.
extras: Additional properties not explicitly defined in the schema.

Validate the current instance against schema-derived constraints.

MarkerOfInterest$validate()

Convert the object to a plain R list using in-memory values.

MarkerOfInterest$to_list()

Convert the object to a JSON-ready R list.

MarkerOfInterest$to_json_list()

Convert the object to a JSON string.

MarkerOfInterest$to_json(pretty = FALSE, auto_unbox = TRUE, ...)

The objects of this class are cloneable with this method.

MarkerOfInterest$clone(deep = FALSE)