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List library sample names per specimen

pmo_list_library_samples_per_specimen.Rd

List library sample names per specimen

Usage

pmo_list_library_samples_per_specimen(
  pmo,
  select_specimen_ids = NULL,
  select_specimen_names = NULL
)

Arguments

pmo

A PortableMicrohaplotypeObject or parsed PMO list.

select_specimen_ids

Optional 1-based specimen ids.

select_specimen_names

Optional specimen names (mutually exclusive with select_specimen_ids).

Value

A tibble with columns specimen_name, library_sample_name, library_sample_count.

Examples

p <- read_pmo(
  system.file("extdata", "example_full_pmo.json.gz", package = "pmotoolsr"))
head(pmo_list_library_samples_per_specimen(p))
#> # A tibble: 2 × 3
#>   specimen_name library_sample_name library_sample_count
#>   <chr>         <chr>                              <int>
#> 1 8025874217    8025874217_lib_name                    1
#> 2 8025874266    8025874266_lib_name                    1