Export specimen metadata

Export specimen metadata

Usage

pmo_export_specimen_meta_table(pmo, separator = ",")

Arguments

pmo

A PortableMicrohaplotypeObject or parsed PMO list.

separator

Separator for list-valued fields.

Value

A tibble of specimen metadata (project_id resolved to project_name; complex nested fields omitted).

Examples

pmo <- read_pmo(
  system.file("extdata", "example_pmo.json.gz", package = "pmotoolsr"))
head(pmo_export_specimen_meta_table(pmo))
#> # A tibble: 6 × 1
#>   specimen_name
#>   <chr>        
#> 1 SRR30825770  
#> 2 SRR30825771  
#> 3 SRR30825772  
#> 4 SRR30825773  
#> 5 SRR30825774  
#> 6 SRR30825775