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Export library sample metadata

pmo_export_library_sample_meta_table.Rd

Export library sample metadata

Usage

pmo_export_library_sample_meta_table(pmo, separator = ",")

Arguments

pmo

A PortableMicrohaplotypeObject or parsed PMO list.

separator

Separator for list-valued fields.

Value

A tibble (sequencing_info_id/specimen_id/panel_id resolved to their names).

Examples

p <- read_pmo(
  system.file("extdata", "example_full_pmo.json.gz", package = "pmotoolsr"))
head(pmo_export_library_sample_meta_table(p))
#> # A tibble: 2 × 4
#>   library_sample_name sequencing_info_name specimen_name panel_name
#>   <chr>               <chr>                <chr>         <chr>     
#> 1 8025874217_lib_name Mozambique2018       8025874217    heomev1   
#> 2 8025874266_lib_name Mozambique2018       8025874266    heomev1